ENST00000418255.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000418255.1 |
Source |
Gencode19 |
Same with |
lnc-MFSD2A-1:1 |
Classification |
antisense |
Length |
785 nt |
Genomic location |
chr1+:40363417..40364770 |
Exon number |
2 |
Exons |
40363417..40363738,40364308..40364770 |
Genome context |
|
Sequence |
000001 TCTCTCTCCA GAACCTCTTC TTGGGGACCC CTCTCTGAAG CCTCTTCTTG GGAGCAGCTT TCTGGAGGAA AACGGGCAGC 000080
000081 ATAGTTGTGC TGTTGCTGAT GGATGGAGAT GTGGAAATGC TTCATGCAGG GATCCAGGGG GTCTGCTCGC ACCGTGATGG 000160 000161 TGACCGGCTT CCGAATACCC AGAGACTGCC TCTTCTCTAC TGTCACAACA TCAATTTCTT CATTCTCTGT CCGAGAAAAG 000240 000241 AGATCAAGAG AAGAAACACA TCCCATGAGA AACACAAACA TAGACCCTAC AGCTTTAGCT GTCTACGCTG GTGCTTGGGA 000320 000321 AGGTCGCCTG CCCCACCTCC TTCCCTGGAC TAGAAGGTTA GATTTGTAAT CATAGGTCGG CGAAGCTGCA GGAACTTCAC 000400 000401 AAAGGTACAA GCGACCATTT CCAAACTACC TGCACCAGAG GCAGAGACTG GGCAGCAGAA TGTCCCAGAT ATGGGGCTCA 000480 000481 TAACACCAGA GACCTGGAGA CACCTGGACA CGCCCTTCTC ATTCACTGGC TTGAAGGTCT CTTAGGTTAA CCTAACCAGG 000560 000561 AGAGGGGCAA TTGGGAGAAA AGTCTCCTCC TGCTCCACAC ATTTTGCAGC CTCCACACAG AAGTCCACCT TAATGGATCT 000640 000641 CGGCCTCGCA AAGGAAGAGC TCCGTTCTCA GCTTCTTTGC ATATCAGGAA GCTTGAGCCC CTTTGTCAGG AAGGCTTCCA 000720 000721 TTGTGTGGAC AATCGCATTA TTTCTCCATT AATAAACCTG ACCATTCAGC CCTCCTGGCC CCAAA |
Predicted Small Protein
Name | ENST00000418255.1_smProtein_98:352 |
Length | 85 |
Molecular weight | 9765.1599 |
Aromaticity | 0.0714285714286 |
Instability index | 81.5369047619 |
Isoelectric point | 9.22467041016 |
Runs | 14 |
Runs residual | 0.0326812253564 |
Runs probability | 0.0392156862746 |
Amino acid sequence | MDGDVEMLHAGIQGVCSHRDGDRLPNTQRLPLLYCHNINFFILCPRKEIKRRNTSHEKHK HRPYSFSCLRWCLGRSPAPPPSLD |
Secondary structure | LLLLEEHHHLLLEEEEELLLLLLLLLLLLLLEEEELLLLEEEELLLLLEELLLLLLLLLL LLLLLHHHHHHHHLLLLLLLLLLL |
PRMN | - |
PiMo | - |