ENST00000417643.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000417643.1

Source

Gencode19

Same with

lnc-FAM54A-1:1,NONHSAT115111

Classification

antisense

Length

734 nt

Genomic location

chr6-:136415853..136546733

Exon number

8

Exons

136415853..136415917,136416854..136416963,136417132..136417157,136417258..136417426,136432134..136432239,136438208..136438310,136483390..136483486,136546676..136546733

Genome context

Sequence
000001 CTTTGCTCCT CCTTTGGCTT CCACCATGAT TGTGAGGCCT CCCCAGCCAT GTGGAACTCA CTTCTCCTTC CTGTCACCAT 000080
000081 GTGAAGAAGG ACGTGTTTGC TTCCCCTTCT GCTATGATTG TAAGCTTCCT GAGGCCTCCC CAGCCCTGCA GAACTAAATC 000160
000161 CAAAGAAGCC ACTATGCTGA AAATACTTTG AGTGGGTTAG AGTTTCGCTC AAGGAAGTGC TGTAGTAGAA AATGGCCATT 000240
000241 TCTCTGTGCT GTGTTCAGAG TAAGAGACAT GGGTGAAAGA GTTATCCGGA ATGGAATGCT GAGGAGACCC TAAAGGGAAT 000320
000321 TTCCGGGTGG ATGGCCAGCA CTGTCACTCG ATGAGTGGAG GATTGACAAA CTTGCCAAAT ACTGCAAGAA AAGATGTTGC 000400
000401 TGATCACGGA TAGGAAATAC TCCAAGTCCC AGGAGATAGT CTGTTCTTAG GAGACTTCCA CACCAAGTCT GCTGACCAGA 000480
000481 GAAGGACCAG TCAACCACCA CACTCTCCGC TGGAGCCCAC TCAGCACCAG GAAGAAACAG ATGGAAAAAC CTAGACTTGC 000560
000561 TCCCTTAGAT CAGTGCTATT ATCAATATCA TCCTCTGAGA GACAAAGCTG TTAAATTACT TTGCCCAGAT GACATGGCCA 000640
000641 GTGAGTATGG AGACAGACCG GAAATTAAGG CTCTGTTCTA GATTCTCGGA ATATAGCAGT GAACAAAACA GATAAAACGT 000720
000721 GCCTGCCCCT GTGG
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Predicted Small Protein

Name ENST00000417643.1_smProtein_113:190
Length 26
Molecular weight 2888.5604
Aromaticity 0.04
Instability index 42.62
Isoelectric point 10.3062133789
Runs 5
Runs residual 0.00830188679245
Runs probability 0.0409291644586
Amino acid sequence MIVSFLRPPQPCRTKSKEATMLKIL
Secondary structure LEEEELLLLLLLLLLLHHHHHHHHL
PRMN -
PiMo -