ENST00000417123.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000417123.1

Source

Gencode19

Same with

lnc-SGSM3-2:1,NONHSAT086850

Classification

intronic(AS)

Length

1932 nt

Genomic location

chr22+:40917804..40922711

Exon number

4

Exons

40917804..40918977,40919370..40919444,40919529..40919722,40922223..40922711

Genome context

Sequence
000001 AAATGAATTT TTGGGATGGT ACAAGGTAAG AGTCAATGTT CCCTCTCTCT CTCTCCTTTT TTTTTTTTTA AGACGGAGTC 000080
000081 TTGTTCTGTT GGCCAGGCTG GAGTGCACTG GCACAATCTC GGTTCACTGC AACCTCCGCC TCCCAGGTTC AAGCGATTCT 000160
000161 CCTGCCTCAG CCTCCTGCGT AGCTGGGATT ACAGGCGCAC GCCACCACGC CCAGCTAATT TTTGTATTTT TAGTAGAGAC 000240
000241 GGGGTTTCAC CATGTTGGTT GGCCAGGATG GTCTCGATCT CCTGACTTCG TGATCCACCC ACCTCGGCCT CCCAAAGTGT 000320
000321 TGGGATTACA GGCGTGAGAC ACTGCACCCA GCCCTCTCTT AATTTTTTTA ACATACAGAT AGCCAGTTCT TTCCTGATTT 000400
000401 GTAAGTTTTT ATTTAAACCA GAGTTAGAAA AATAATTAAA ATAACACTAC CTCTAAACAC TCAAAACCAC TGCTATGACA 000480
000481 TAATCCTGCC ATTTCAGTAG AACAGAAAAT CCCCACGCCT TCCCCTCAGC TCGGAGGGCA CAGGACTGGG CAGCAAGCTC 000560
000561 CACCAGTTTG TAGAAGGAGT TCAACTTCCA GACAGCAGGG AAATGCCTTT CTCTGAAGTT ATTACATGAG TTCACACTGA 000640
000641 AGGGAAAGAA GAAAGTGAGC CTTATCATTT TCCCAAGATG CTGTGAGATG TGTTGGATTT ACTCTCACTC ATAATTGTGC 000720
000721 AGGATGGTTG TTTTGTTTTG TTTTGAGGCA GGGTCTCACT CTGTCACCCA GGCTGGAGTG CAGTGGTGTG GTCTCAATTC 000800
000801 ACTGCAACCT CTGCCTCCAG GGTTCAAGCA ATTCTCCTGC CTCCGCCTCC CGAGTAGCTA GAGTCACAGG TGTGCACCAC 000880
000881 CATGCCTTGC TAATTTTTGT ATTTTTAGCA GAGATGGGGT TTCATCATGT TGGCCAGGCT GGACTCCAAC TCCTGACCTG 000960
000961 AAGTGATCCG CCCCCCTCAA CCTCCCAAAG TGCTGGGATT ACAGACGTGA GCCACTGTGC CTAGCCACAG GTATGTTCGG 001040
001041 GATGGTTTCA ACCAACATCA ATAGAACCAA CTAAGAATAG ATGGCCTTCA GCAACACAGA GGGGTAGCAC AGGAGTTCCA 001120
001121 AAGATCAGTA GTTTGAAAAT CAGGTCACAG GGAGTCCACG CTATATGATC TTGGGGTCTC ACTTTGTGGC CCAGCTGGAA 001200
001201 TACCGTGGTG CAAACACGGT TCACTGCAGC CTTGACCTCC CAAATTCAAA GATGAGGTTT CACCATGTTG CCTAGGCTGG 001280
001281 TCTCAAACTT CTGACATCAA GCAATCTGCC CACCCTGGCC TCCCAAAGTG TTGGGATTAC AGCTGTGAGC CACTGCACCC 001360
001361 GGCAAATAAT CTTTTTAAAA CAGATTGTGA TTCCGCAGGT CTGAGGTGGC GTCTGAGATT CTGCATTCCT AATAGGCTTC 001440
001441 CAGAGACAGC ATCTCACCAT GATGCCCGAC TAGCCTTGAA CTCCTGGCTT CAAGTGATCC TCCCCATTCG GCCTCCCAAA 001520
001521 GCGCTGGGAT TATAGGTGTG AGCCACCATA ACAGGCCCAA AAGTAACATC TGATCAAAAA TCTCAAGGTG ATGCGGGAAC 001600
001601 AAGCCATGAG GCTACTCAGG GAAACGTGCT CTAAATAGAA GGAATAACAA GTACAAAAGC CCTGATATGC GAGCTAAGGT 001680
001681 GCTCAGGGAC AACAAACAAA GCCAATATGG TTGGGGTAAA ACAAGCAAGG GAGAGAAGAG AAGCAGATAA AATAAGAGTT 001760
001761 ACAAAGCAGT TCATGTGGGA CTTTGTAGAC GAGTATAAGG ACTGTGGCTT TTTCAGTGAA TGAGAATAAC TGGCAGGTTC 001840
001841 TGAGCAAGGA GGGATATGAC CTGATTAATT TTAAATGGAT AATGTAATCG TGTTTAAACT CAAAAAGCTG AATTAAACAC 001920
001921 CTGTTCCATC TC
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