ENST00000417096.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000417096.1

Source

Gencode19

Same with

lnc-KLF7-1:13,NONHSAT076589

Classification

intergenic

Length

556 nt

Genomic location

chr2-:208051441..208100607

Exon number

3

Exons

208051441..208051712,208100162..208100334,208100497..208100607

Genome context

Sequence
000001 AAATTCGAAA TGGAAACTAT GACATGACTC AACATCCTCA AGCCCTGAAG TAATAATTAG CACATAAAGT TGGTCTGTTA 000080
000081 TGGACTTTGT GTTGTGCTCC CTGCAAAATT GGATACAGAG AGAAGACAGC TGTCTGCAAA CCAGAAAGAG AGTCCTCACT 000160
000161 GCACTTCATA TCTGCCAATG GATCCTTGCT CTTGAACCTC CCAACCTGCA GAATCATGAG AAACAAACAT TGTGTAAGCC 000240
000241 ACCCACTCTA CAGTAATTTG TTCTAGCAGA CCGAGCTGAC TGAGCATTTG CTCTAGGGGA AGCCTGCAGC TATGTCATGA 000320
000321 GGACCCTCAA CAGCCCTGTG CAGAGGACTA TGTGGCATGA AAGATACCTT CTGCCAACAA CCAGCCCCAA CTTGCCAAGC 000400
000401 ATGTGAACAA GCTAAACTGA AAGCAGATCT TCAGCCCCAA TCAAGCCTTC AGATGACAGT AACCTCAGCC AATATACTGA 000480
000481 CTATAACCTC ATAAAAGACC CTGAACCAGA ACCCTCTAAG CCACTCTCAA ACTCTACCCC ACATAAACTG TGAAAT
[back to top]

Predicted Small Protein

Name ENST00000417096.1_smProtein_356:493
Length 46
Molecular weight 4871.5668
Aromaticity 0.0222222222222
Instability index 79.9444444444
Isoelectric point 5.86920166016
Runs 7
Runs residual 0.00669191919192
Runs probability 0.0353925353925
Amino acid sequence MKDTFCQQPAPTCQACEQAKLKADLQPQSSLQMTVTSANILTITS
Secondary structure LLLLLLLLLLLLHHHHHHHHHHLLLLLLLLEEEEEELLLEEEELL
PRMN -
PiMo -