ENST00000417096.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000417096.1 |
Source |
Gencode19 |
Same with |
lnc-KLF7-1:13,NONHSAT076589 |
Classification |
intergenic |
Length |
556 nt |
Genomic location |
chr2-:208051441..208100607 |
Exon number |
3 |
Exons |
208051441..208051712,208100162..208100334,208100497..208100607 |
Genome context |
|
Sequence |
000001 AAATTCGAAA TGGAAACTAT GACATGACTC AACATCCTCA AGCCCTGAAG TAATAATTAG CACATAAAGT TGGTCTGTTA 000080
000081 TGGACTTTGT GTTGTGCTCC CTGCAAAATT GGATACAGAG AGAAGACAGC TGTCTGCAAA CCAGAAAGAG AGTCCTCACT 000160 000161 GCACTTCATA TCTGCCAATG GATCCTTGCT CTTGAACCTC CCAACCTGCA GAATCATGAG AAACAAACAT TGTGTAAGCC 000240 000241 ACCCACTCTA CAGTAATTTG TTCTAGCAGA CCGAGCTGAC TGAGCATTTG CTCTAGGGGA AGCCTGCAGC TATGTCATGA 000320 000321 GGACCCTCAA CAGCCCTGTG CAGAGGACTA TGTGGCATGA AAGATACCTT CTGCCAACAA CCAGCCCCAA CTTGCCAAGC 000400 000401 ATGTGAACAA GCTAAACTGA AAGCAGATCT TCAGCCCCAA TCAAGCCTTC AGATGACAGT AACCTCAGCC AATATACTGA 000480 000481 CTATAACCTC ATAAAAGACC CTGAACCAGA ACCCTCTAAG CCACTCTCAA ACTCTACCCC ACATAAACTG TGAAAT |
Predicted Small Protein
Name | ENST00000417096.1_smProtein_356:493 |
Length | 46 |
Molecular weight | 4871.5668 |
Aromaticity | 0.0222222222222 |
Instability index | 79.9444444444 |
Isoelectric point | 5.86920166016 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0353925353925 |
Amino acid sequence | MKDTFCQQPAPTCQACEQAKLKADLQPQSSLQMTVTSANILTITS |
Secondary structure | LLLLLLLLLLLLHHHHHHHHHHLLLLLLLLEEEEEELLLEEEELL |
PRMN | - |
PiMo | - |