ENST00000416930.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000416930.2

Source

Gencode19

Same with

lnc-ROPN1L-1:1,NONHSAT100444

Classification

intergenic

Length

483 nt

Genomic location

chr5+:10479483..10482421

Exon number

2

Exons

10479483..10479529,10481986..10482421

Genome context

Sequence
000001 GATTAGAATG GGCGCTCAGG CTTGGCTCAG ACACCCCACA TCTTTAGGGA GACACCACCT CTTTGCTTCT CCAAGGCTGT 000080
000081 TTGCTGCATC TGAAAAGACA ATCTGGAACA AGAGGAGAGT CAGGCCAGCC ACAGTGGTTC ATGCCTATAA TCCCAGCACT 000160
000161 TTGGGAGGCC GAGGCAGGTG AATCACTTGA GGTCAGGAGT TCGAGACCAG CCTGGCCAAC ATGGGGAAAC CCTGTCTCTA 000240
000241 CTAAAAATAC AAAAATCAGC CGGGTGTGAT GGTTGCACCT GTAATCCCAG CTACTCGGGA GGCTGAGGCA GGAGAATCGC 000320
000321 TTAAACCCAG GAGGTGGAGA TTGCAGTGAG CCAAGATCAT GCCACTGCAC TCCAGCCTGG TGACAGACGA GACTCCGTCA 000400
000401 AAAAAAAAAA AAAAAGGTTA AAATGCTACA CTTTCTTATC ATAGTTTACC GCAATTAAAA ATCAAAACAA AACAAAACGA 000480
000481 AAA
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Predicted Small Protein

Name ENST00000416930.2_smProtein_140:268
Length 43
Molecular weight 4663.2733
Aromaticity 0.0714285714286
Instability index 57.730952381
Isoelectric point 8.34393310547
Runs 7
Runs residual 0.00949367088608
Runs probability 0.0328437681378
Amino acid sequence MPIIPALWEAEAGESLEVRSSRPAWPTWGNPVSTKNTKISRV
Secondary structure LLLLHHHHHHHLLLLEEELLLLLLLLLLLLLLLLLLLEEEEL
PRMN -
PiMo -