ENST00000416295.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000416295.1 |
Source |
Gencode19 |
Same with |
NONHSAT089815 |
Classification |
sense |
Length |
1088 nt |
Genomic location |
chr3+:50312065..50313875 |
Exon number |
5 |
Exons |
50312065..50312365,50312443..50312890,50312991..50313046,50313136..50313275,50313733..50313875 |
Genome context |
|
Sequence |
000001 TGCTGATGGA AGCTCTCCCT GTTCAGTCCC ATCTCCACAT CCTTTCCTGG GCTGTGTCTC CACCCTGTGG ATGCTGCCCA 000080
000081 ACCCACACTC TTCCAGTCCA CACTCTTCAC AACCCAAACA TGCTGAGGGT AGACGCCTCA AAGGCGAGGA GACACTAGCC 000160 000161 CCAGCTGTCC GGGAGCACCA ATGGTCATTA CCCCTTCTCA TCCCTGCAGA CGTTGGCACG GTGCTGAAGG TGATCTCGGT 000240 000241 CCCCAAGGGC AGTAGGCCCA GCGCAGAGGG GCTGCTCCTG GAGGAGCTGC ACGTGTTTGA GGACTCGGCC GCTGTCACCA 000320 000321 GCATGCAAAT TTCTTCCAAG AGGGTGAGTG ACCAGGATGG GGGTCGGGGT GGGATGGACT GAGCTTGTGC CTGGCGCGTC 000400 000401 CCAAGCCTCT GGCCCCTTTT GGTAGTTTGC AGTCCCGGGT TTGAGTACAG GCTCTGGCTT TGTTAGACTG TGTGACCTGA 000480 000481 GGCGTAAGAC CTCAGTGTTC CCATCTGTCG AGTGGAAGAA GGGATCCCTG ACCGATGGGA GGCAGGCGTG GGGTCGCCCT 000560 000561 CGGTCAGCCC AGAGCCCCTC GTGCCCCCTA GCACCAGCTG TACGTAGCCT CGCGGAGCGC GGTGGCCCAG ATCGCGTTGC 000640 000641 ACCGCTGCGC TGCCCACGGC CGCGTCTGCA CCGAATGCTG TCTGGCGCGT GACCCCTACT GCGCCTGGGA CGGGGTCGCG 000720 000721 TGCACGCGCT TCCAGCCCAG TGCCAAGAGG CGGTTCCGGC GGCAAGACGT AAGGAATGGC GACCCCAGCA CGTTGTGCTC 000800 000801 CGGAGACTCG TCTCGTCCCG CGCTGCTGGA ACACAAGGTG TTCGGCGTGG AGGGCAGCAG CGCCTTTCTG GAGTGTGAGC 000880 000881 CCCGCTCGCT GCAGGCGCGC GTGGAGTGGA CTTTCCAGCG CGCAGGGGTG ACAGCCCACA CCCAGGTGCT GGCAGAGGAG 000960 000961 CGCACCGAGC GCACCGCCCG GGGACTACTG CTGCGCAGGC TGCGGCGCCG GGACTCGGGC GTGTACTTGT GCGCCGCCGT 001040 001041 CGAGCAGGGC TTTACGCAAC CGCTGCGTCG CCTGTCGCTG CACGTGTT |
Predicted Small Protein
Name | ENST00000416295.1_smProtein_5:157 |
Length | 51 |
Molecular weight | 5560.4491 |
Aromaticity | 0.02 |
Instability index | 75.912 |
Isoelectric point | 8.68841552734 |
Runs | 8 |
Runs residual | 0.0046783625731 |
Runs probability | 0.0270159865749 |
Amino acid sequence | MEALPVQSHLHILSWAVSPPCGCCPTHTLPVHTLHNPNMLRVDASKARRH |
Secondary structure | LLLLLLLLHHHEEEEELLLLLLLLLLLLLLLLLLLLLLEEEELHHHHLLL |
PRMN | - |
PiMo | - |