ENST00000416037.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000416037.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
overlapping(AS) |
Length |
4485 nt |
Genomic location |
chr22+:42486935..42535286 |
Exon number |
7 |
Exons |
42486935..42487185,42487301..42487604,42488123..42488236,42520052..42520567,42520880..42521412,42532208..42532723,42533036..42535286 |
Genome context |
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Sequence |
000001 GCGCATGCTC ATCTACAGAA ACGCCGCTTG GCCTTTGGAC TACACCATCT GTCGCTCGCT CTAACGAGCC GGCGTTGCCG 000080
000081 CCAGGGGACG CTCGGGCCGC AGGAGGTCGC TGGGTCGTGA GCTGGCGCCG GGGACGCCGA GCGACTGCGG GGTTTCCCTC 000160 000161 AGCGTCCTGC TATCCGGCTG CCCGCCGCGC TCCTTGGTAG TGTCCGTGGG CGCGCAGGCC TTGAAGAACC TCCTCGTGGC 000240 000241 GGGACCCCGA GCGCAGGAGA GGTGTCAAAG AGCTGGCGCG TCTCCAGAGC CCCGGGAGGA AGGCTGTAAC GGCAGCCCCA 000320 000321 TCGTAGACAG GGACATTCGC ATCCCGAGCC CTGGATCTCT GAAAACCAGC CCAGAATTTG GAAGCTGGAA GGAACTTTAG 000400 000401 ATCGTCCATT CTGAGTGTCT CTCTTCGCTG GCGTTTTCCC ACTGAGGTTA TGTAAACATG AAGAGGAGCC TACAAGTGTC 000480 000481 AAGGAAAAAA CGACAGCTAA CCACAGGGCA GGCCATGGGC AAGATATCTC AGTGTTCTCC GCTCTCATAG GTCAGAGTGA 000560 000561 GACTCACCTA GGCTGGACTG CAATGGTGCA ATCTCGGCTC ACTGCAACCT CCGCCTCTCA TGTTCAAGCC ATTCTCCTGC 000640 000641 CTCAGCTTTC CGAATCGCTG GGATTACAGG TCACGACCCC CAGGAGACCT GGAGGACTGA ATGCTGCTGC CCCCAAGGAG 000720 000721 GAGGCTGCTG TCTTATCCCA GGAGGGAGAG CAGGTGAAGT CCCCAGGGGA GGAAGCACCT AGCCCCATTC CTGCTGAGCA 000800 000801 GGAGGTGGCA GGTACCCCAG ACTGGGAGGT AAGGACAGCC CGGGGCTTCG ACTGAACGTC TCCAGCGTGG GTCCAACTGA 000880 000881 GCAGCCATGG AGCACTGCAG AGTGGGAGGC AGCAGGGCAG GGAGGCAGTG CTGGAGGCTG GCTCAACCCC AAGACCAGCA 000960 000961 GGCCAAGCTG CCATCCCAGG GGAGCGAGGA CGTCTGTGCA GAGCTGAGAG GCAGCAGCCA TGTGTGAACA GACTGGGCCT 001040 001041 CATCCTGGCC CCACCGACTT TGTGTGGACA GAGCCTGTTT CCCTGTCTGT GCAACACAGA ACCTGCCTGA TCTCACTGCT 001120 001121 GGATCCCTCT TCTTCCTGCC AGGAAAATAA AAAGGTTCAA AAGGAAGTTG CTGCGTATCC ATCTGAGGCC TCTGAGGACA 001200 001201 GCAAAGAGCA AAGGCCCTGG GACCGGGTCT ACGTGCCCAT GACAGAGCTC TGGCTGGACT GGTTCTGAGC CTCTAACACC 001280 001281 CCCAAGACTC AGAACCGTGA AGAAAATCTT TCCAATAAAT CCAAGAGTTG CTGCTGCTAT AGGCCAGGCT GCCACCTTTC 001360 001361 GGGGCCTCCG TCTTCAGACA AACCCAGCCT GGCTTCATCC ACACTCCCTG TCCCCACAGC TGCAGGAACA GCACTTCCTG 001440 001441 CCACCGAGCC GTGTGACCAC AGTGGATTGT CTCTGGAGGG GCCCAAGGGG GCCCTGGCCA CCCTTCTGAC TGACTCGGTG 001520 001521 CCAGGGGACA GACCAACGTC CCTCTCGTGC TGACAGCCGG GCCGCACCCT GGCATGAGGG CATTTACAGA AATGCTGGCG 001600 001601 GAACTGCTGC CAGGGAGGCT GTAGGGTCCT CTGGCAAAAG AGGCCTCAGG TGGCTCCTCA GAGTGTCTGT GGTTCTCTGT 001680 001681 CCCAGGCTGT TCCCTAAGAA GGTCTGCCCA GGACTCAGGT CACGACCCCC AGGAGACCTG GAGGACTGAA TGCTGCTGCC 001760 001761 CCCAAGGAGG AGGCTGCTGT CTTATCCCAG GAGGGAGAGC AGGTGAAGTC CCCAGGGGAG GAAGCACCTA GCCCCATTCC 001840 001841 TGCTGAGCAG GAGGTGGCAG GTACCCCAGA CTGGGAGGTA AGGACAGCCC GGGGCTTCGA CTGAACGTCT CCAGCGTGGG 001920 001921 TCCAACTGAG CAGCCATGGA GCACTGCAGA GTGGGAGGCA GCAGGGCAGG GAGGCAGTGC TGGAGGCTGG CTCAACCCCA 002000 002001 AGACCAGCAG GCCAAGCTGC CATCCCAGGG GAGCGAGGAC GTCTGTGCAG AGCTGAGAGG CAGCAGCCAT GTGTGAACAG 002080 002081 ACTGGGCCTC ATCCTGGCCC CACCGACTTT GTGTGGACAG AGCCTGTTTC CCTGTCTGTG CAACACAGAA CCTGCCTGAT 002160 002161 CTCACTGCTG GATCCCTCTT CTTCCTGCCA GGAAAATAAA AAGGTTCAAA AGGAAGTTGC TGCGTATCCA TCTGAGGCCT 002240 002241 CTGAGGACAG CAAAGAGCAA AGGCCCTGGG ACCGGGTCTA CGTGCCCATG ACAGAGCTCT GGCTGGACTG GTTCTGAGCC 002320 002321 TCTAACACCC CCAAGACTCA GAACCGTGAA GAAAATCTTT CCAATAAATC CAAGAGTTGC TGCTGCTATA GGCCAGGCTG 002400 002401 CCACCTTTCG GGGCCTCCGT CTTCAGACAA ACCCAGCCTG GCTTCATCCA CACTCCCTGT CCCCACAGCT GCAGGAACAG 002480 002481 CACTTCCTGC CACCGAGCCG TGTGACCACA GTGGATTGTC TCTGGAGGGG CCCAAGGGGG CCCTGGCCAC CCTTCTGACT 002560 002561 GACTCGGTGC CAGGGGACAG ACCAACGTCC CTCTCGTGCT GACAGCCGGG CCGCACCCTG GCATGAGGGC ATTTACAGAA 002640 002641 ATGCTGGCGG AACTGCTGCC AGGGAGGCTG TAGGGTCCTC TGGCAAAAGA GGCCTCAGGT GGCTCCTCAG AGTGTCTGTG 002720 002721 GTTCTCTGTC CCAGGCTGTT CCCTAAGAAG GTCTGCCCAG GACTCAGGTA ATCATATGCT CATTAGAAAC TCTTGGGCAC 002800 002801 TGCCTGTGTG CCCAGCCCAG CCCATTATGT CGGTGAGGAC AGACGTGGAG GACAGCAGTC CCTGCCCTTG GTTGGGGCTC 002880 002881 CAGGCCAGCA AGGGCCACAG CCCCAGAAGG CAGAGCAGGA AGACAGGACT CGGGGCAGGT GAAGCAGCCT TCTCGTTGGC 002960 002961 AGAAGGGAAA CAGAAGCCCG GGGTGGGGAA GGGTGGGGAA GGGTGGGGAA GGGTGGGCCC GGGGTCACAC GGGGTAATGG 003040 003041 CAGAGCAAGG ACTAGGGTCA GGGTCTCTGG CTCTCAGCTG CCCATGCCAC CTCCTCCTTC TCTACCCGCC CCAGTGCCTT 003120 003121 ATGGGTCCAA GGTTGACTCC TGTCCCTAGG GCAGGCCTGT GGGCCCTGCC TGATCCCTAC TGGGAGGATG GTACCTAGGG 003200 003201 TTGGAGCCAA ACAAGTGTCC TCCTCCAGCG CCAGCCTGGC CCTGAGTGCA AACTCGTCAC TGGTCAGGGG TCCGGACAGC 003280 003281 AGCATCCCTG AGGGCCCAGA GAGGTGGCCA GTCCTGTGGT GAGGGTGAGA GGTGTCAACG TGCTGGCGGT CCTCGCTCGC 003360 003361 TCTCAGCGCC TCCTCGGCCT CAGCTTCTGC TCTGACCACA CTTGAGGAGC CCTTCAGCCC AGCGCTGCAC TGTGGGAGCC 003440 003441 CCTCTCTGGA CTGGTGGAGG CTGGAGCCGG CTCCCTCTGC TTGCGGGGAG GTATGGAGGG AGAGGCGTGT GCGGGAACCT 003520 003521 GGGTTGCTCG CGGGCCAGCA CCAGTTCTGG GTGGGCAGGG GCTCAGCGGG CCCTGCACTC GGAGCGGCCG GCTGGTGCCT 003600 003601 CTGGCCCCAG GCAGTGAGGG GCTTAGCACC TGGGCCAGCA GCTGCAGAGG GGGCACCGGG TCCCCCAGTA CTGCTGGCCT 003680 003681 GCCGGCGCTC ACCACACTTG AATTGTCGCC AGGCCTCAGT CACCTCCCCG CGGGGCAGGG CTCAGGACTT GCAGCCTGCC 003760 003761 ATGCCCAAGC CTCCCTACGG TGGGCTCCCT GCGAGGCCTG AGCCTCCCGG ATGGGTGCCT CCCACTGCTC CACGGCACCT 003840 003841 GGTCCCGTCC ACTGCCCAAG GGCTGAGGAG TACAGGTGCC TGGTGTGGGA CTAGCAGGCA GCTCTGCCTG TGGCCCTGGC 003920 003921 ATAGGATCCA CTAGGCGAAG CTGGCTGGGC TCCTGAGTCA GGTGGGGACT TGGAGAACTT TTATGTCTAG CCAGAGGATT 004000 004001 GTATATGCAC CAATCAGCAC TCTGTGTCTA GCTCCGGGTT CGTGCATGCA CCAATTAGCA CTCTGTATCT AGCTAATCTG 004080 004081 GTGGGGACTT GGGGAACCTT TATTTCTAGC TAAAAGATTG TAAATACACC AATCAGCACT CTGTGTCTAG CTCAAGGTTT 004160 004161 GTAAACACAC CAGTCAGCAC CCTGTGTCTA ACTCAAGGTT TGTAAACGCA CCAATCAGTG CTCTCTGTCT ACTCTATCTA 004240 004241 GCTAATCTAG TGGGGACTGG GACAACCTTT ATGTCTAGCT AAGGGATTGT AAATACACCA TTCAGCACTC TGTGTCTAGC 004320 004321 TCAAGGTTTG TAAATATACC AATCAGTACT CTGTGTCTAG CTCAGGGATT GTAAATGCAC CAATCAGCTC TCTGTAAGTG 004400 004401 GACCAATCCA CTGTCTGTAA AATGGGCCAA TCAGCAGGAT GTGGGTGGGG GTCAGATAAG GGAATAAAAG CAGGCTGCCT 004480 004481 GAAGT |
Predicted Small Protein
Name | ENST00000416037.2_smProtein_1019:1267 |
Length | 83 |
Molecular weight | 9453.4854 |
Aromaticity | 0.0975609756098 |
Instability index | 55.362195122 |
Isoelectric point | 4.66192626953 |
Runs | 13 |
Runs residual | 0.0226348854398 |
Runs probability | 0.0247442012148 |
Amino acid sequence | MCEQTGPHPGPTDFVWTEPVSLSVQHRTCLISLLDPSSSCQENKKVQKEVAAYPSEASED SKEQRPWDRVYVPMTELWLDWF |
Secondary structure | LLLLLLLLLLLLLLEEELLEEEEEEEEEEEEEELLLLLLHHHLHHHHHHHLLLLLLLLLL LLLLLLLLEEEELLLEEELLLL |
PRMN | - |
PiMo | - |