ENST00000413479.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000413479.1

Source

Gencode19

Same with

lnc-TMEM178-2:6,NONHSAT070276

Classification

intronic(AS)

Length

800 nt

Genomic location

chr2+:40447283..40481903

Exon number

4

Exons

40447283..40447525,40450770..40450891,40478824..40478914,40481560..40481903

Genome context

Sequence
000001 ATAGGCTTTT TTTTTTTTTT GAGGAAAAAG AAGAAAGAGA AAGAGACAAA GGAAAAGGAG AAAGACAAGA GAGGAAGAAG 000080
000081 CAGGAGGAAA ACAGTGGAGA GAAGAAGAAA AAAGAGAAAA AATAAATTAC AGCTATCTGG GCTTCCATGG GAGTGCCAAC 000160
000161 TCTGACAGCT GAGACATCTC TGACTTGGCT CTTTCACCTC TTGTGCAAGG GAAGAACAGC ACTATTTTTA AAGGAGGTCA 000240
000241 TTAGTTTTGG AAATCACTAG TGGGTAAAAA AGACCAATTT GCAACTAGGC TCTCATGCTC TGTTGAAAAC TATGTCACAA 000320
000321 TATCACAATA CTAGATGCTG GGCTCAAGAC AGCAAACAGA AAGCAGCAAG GGCAGTGACT GGAAGCTGGG AGAGAGGGTC 000400
000401 AACAGCTGAA TCTCAGCCTG ATGGAGGCCA CCATTTAATA AGTAAATACA TGCACGGCTA TTTAGATCCT GCATCAGACA 000480
000481 GGTCATCAGA AAACATGAAG CTAAATGCAG TAAAGAATTA CTCTCTTGAA CTCTTGAAAA TATCAAAAAC ATGAAGCTAA 000560
000561 ATGCAGTAAA GAATTAGTCT CTTGAACTCT TGAAAATATC ATTTTCTTAT AGAAATGGTT TAAAAATTTC TTTTTTATTA 000640
000641 TTTCTAATTT TCCTTCAGAA AATTGTGAGT TTTAACCTAC AACACATACA CTCCAAGGTA ATGCCACTCT AATGCTGTCT 000720
000721 AGTTGATCTG AATAACTAAC TGGTCAATTA TCAGATCCAC CAAACTGTCT CTCTGGAGAT TAACTTCTGC CAGCATATTG 000800
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Predicted Small Protein

Name ENST00000413479.1_smProtein_311:553
Length 81
Molecular weight 8998.9186
Aromaticity 0.075
Instability index 52.2875
Isoelectric point 9.16693115234
Runs 10
Runs residual 0.0138157894737
Runs probability 0.0456986398162
Amino acid sequence MSQYHNTRCWAQDSKQKAARAVTGSWERGSTAESQPDGGHHLISKYMHGYLDPASDRSSE
NMKLNAVKNYSLELLKISKT
Secondary structure LLLLLLLLLLHHHHHHHHHHHHHLLLLLLLLLEELLLLLLEEEEHHHHLLLLLLLLLLHH
HHHHHHHHHHHHHHHHHLLL
PRMN -
PiMo -