ENST00000413339.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000413339.1 |
Source |
Gencode19 |
Same with |
lnc-PFKP-14:1,NONHSAT011056 |
Classification |
intergenic |
Length |
536 nt |
Genomic location |
chr10+:3876142..3876920 |
Exon number |
2 |
Exons |
3876142..3876429,3876673..3876920 |
Genome context |
|
Sequence |
000001 AGTAACAGTG ACACTCCAAG ACCAAGAGAG AGGCCGCCCT GGTGGGGTTC CGCTTGCTCA CTCGCGCGTG GTGCAGTCTG 000080
000081 GGGCACATTA TTTATTTAAG CCATGTGAAC TCCAGCTGCC AACCTAAAAT GAGGATGATG CTACTATCTA CTTCATGGAT 000160 000161 TATTCTGAGG ACAAAAGGAG CTAACCCACG TACAATGCAC GGCTCTCCAC CCAGGACTAA GAAAGGTTCA CTGCAGTGGC 000240 000241 TTCTGTTTTT GATGCTGTAT CAGTAAGTCA TCAGTTTAAT GAAATGAGCA ACACCTGATC CCTCTGTCTG AGACACATGG 000320 000321 ATGAGATTCC TGAGAAGGAA GCTGGGCGGT TGTTTCTTGG TTTGGAGCAG AGGAGGAAGT GTTACATATG GTGTTGAGAT 000400 000401 GCTGGCACTG GATCTCACCC TTCCTCTGTA TGACTGTCCT TCATGTGATA GGACCACACT TGTCACCGTC CTACCTACAT 000480 000481 CCCAGCGCCA GTCTCCACCT CATCCAGAGG CGGTTAATAA ATGCTCCCTC AATGGA |
Predicted Small Protein
Name | ENST00000413339.1_smProtein_128:265 |
Length | 46 |
Molecular weight | 5291.4003 |
Aromaticity | 0.0888888888889 |
Instability index | 40.8266666667 |
Isoelectric point | 12.0165405273 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0284275872512 |
Amino acid sequence | MRMMLLSTSWIILRTKGANPRTMHGSPPRTKKGSLQWLLFLMLYQ |
Secondary structure | LEEEELLLHHHHHHLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHL |
PRMN | - |
PiMo | - |