ENST00000413151.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000413151.1 |
Source |
Gencode19 |
Same with |
lnc-UXS1-1:1,NONHSAT072999 |
Classification |
intergenic |
Length |
424 nt |
Genomic location |
chr2-:106575540..106578462 |
Exon number |
2 |
Exons |
106575540..106575763,106578263..106578462 |
Genome context |
|
Sequence |
000001 GGTGCTGGCT TTCAAGTCTC CTCCAAATGC AACTGACCCA GGTCTGCCTG TCCTCCATTA GCTTTTGCTC GTTGGAGAGG 000080
000081 GATAACACAC CGCTAAGAAA AAGACTTGTT CTGAGAGTGA GGACTGCCCC CGGATTTTGT AACCAGTTGC AACCACCTGA 000160 000161 AAGCAGCTCT GGGGAAGAGG TCATTGAAGA GTCTTTCCAG GTGGAAAGCG AAGTAAATGA ACTCTGGGGT GGTGTCTCCC 000240 000241 AACTCTCACT TCCAGCTCTC CTGTGTTTGT AGACTCTGTG TTCCTAAACA AGGGAAAATA CAGCCACAAC CTCCAAAGGA 000320 000321 CAAGTGCTTA TTCATTCCTT TAATTTATCT TTATTGAGGA TGTTCCATGT ACAGTGGAAG AAAAATTGAA AGTGAATAAA 000400 000401 GGAAGCTGAA GATGTTTAAA GATA |
Predicted Small Protein
Name | ENST00000413151.1_smProtein_26:271 |
Length | 82 |
Molecular weight | 8995.1914 |
Aromaticity | 0.0493827160494 |
Instability index | 70.5012345679 |
Isoelectric point | 4.60504150391 |
Runs | 14 |
Runs residual | 0.0306597988717 |
Runs probability | 0.0342884901708 |
Amino acid sequence | MQLTQVCLSSISFCSLERDNTPLRKRLVLRVRTAPGFCNQLQPPESSSGEEVIEESFQVE SEVNELWGGVSQLSLPALLCL |
Secondary structure | LLEEEEEEEEEEEEEELLLLLLLLEEEEEEEEELLLLLLLLLLLLLLLLLEEEELLEEEE HHHHHHHLLHHHLLLHHHLLL |
PRMN | - |
PiMo | - |