ENST00000376025.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000376025.2
Source	Gencode19
Same with	lnc-SHROOM4-1:2
Classification	sense
Length	7406 nt
Genomic location	chrX-:50108408..50213737
Exon number	28
Exons	50108408..50112018,50113425..50113548,50114723..50114833,50117970..50118056,50119023..50119164,50119757..50119917,50121097..50121230,50121576..50121689,50122625..50122732,50122979..50123075,50125494..50125601,50127166..50127262,50127718..50127822,50129356..50129584,50130552..50130651,50131525..50131616,50133326..50133407,50134435..50134574,50135339..50135447,50136150..50136333,50144035..50144137,50146059..50146181,50146489..50146595,50147047..50147182,50163401..50163505,50165444..50165524,50167246..50167356,50213033..50213737
Genome context
Sequence	000001 GTACTTTAGC CTTCCAGGCT TAGGGACTCA GGCTGCCCAG ACCTGAAGCG GTGTGCGGCC ATGGACCGCG GAGCTGCCGC 000080 000081 AGCCCAGGGC ACTGCCCCGC CTCAGGATGG AGAGCAGCCC GCTGAGTCTC CAGAGCCTCC GCCGCCTTGG CCGCCGCCGC 000160 000161 CACCACCACC GGCTCCGCCG CCGGCTCCGC CGCTGCTCTC CGAGGCTTCG CCAGAACCCA TACCAGAGCC CTGTCCAGAG 000240 000241 CTTGCTCCAG GTCCCTGTCC AGAGGCGACC TCAGAATCAG CCACAGAACT GTACACAGAA CCGACCCCAG AACCAGCCAC 000320 000321 AGAGCCGGCC TCAGAACCGG CCCCAGAACC TGCCACAGAG CCGGCCCCAG AACCTGCCAC AGAGCCGGCC CCAGAACCGG 000400 000401 CCCCAGAACC TGCCACAGAG TCTGCCCCAG AGCCGACTCC AGAACCTGCC CTAGAGTCGG TCCCAGAGCC GGCCCCAGAG 000480 000481 CTGACTCCAG AAGTTGCCCC AGAGCTGGCC CCAGAGCCGA CCCCAGAACC TGTGACAGAG CTGGCCCCAG AGTTCTGCCC 000560 000561 TGAGGCGGCT CCAGAGTTCC GTCCAAGTCC AGCACCATGT CTATTGCAAT GTCCGGTGGA CACTCGAGAG AGAGGTCTAA 000640 000641 AGACCTCGCC ATCGCCATCG CCATCGCCAT CGCCCAGAAC GCCAATGTCG TGGTCCAGAA TAAAGAAAAT ATTGAAGGAA 000720 000721 GGACCTATGC TGAAGAACTG TAACTCTTTC AAGAGATGGA AGCTTAGATA TTTTCTGGTT CAAGGACAGA AGCTCTACTT 000800 000801 TGCACACCAT CCCGCGTTTG CACACTTTGA AACGATTGAT CTGTCTCAAG CCACTGTGGC AGAAAGCAGC TGTAGAAACC 000880 000881 TTTGCCACAG TTTTTGTGTT ATTACACCAC AACGAAAAAT CACTCTGGCT GCACCCAACC GGAAAGACAT GGAAGAATGG 000960 000961 ATTAACATCA TAAAAACCAT CCAACAGGGA GAAATTTATA AGATACCTGC AGCAGAAAAC AACCCTTTTC TTGTTGGAAT 001040 001041 GCATTGTTGG TACTCCAGTT ACAGCCACCG GACCCAGCAC TGCAATGTTT GTCGAGAGAG CATTCCTGCC TTATCTAGAG 001120 001121 ATGCCATCAT CTGTGAAGTG TGCAAAGTGA AATCTCACAG ATTGTGTGCT TTGAGAGCAA GCAAAGACTG CAAGTGGAAT 001200 001201 ACATTGTCTA TCACTGATGA CCTCCTTCTG CCTGCAGATG AAGTAAACAT GCCCCATCAA TGGGTAGAAG GAAACATGCC 001280 001281 TGTCAGCTCT CAGTGTGCAG TGTGTCATGA GAGCTGTGGC AGTTATCAAA GACTTCAAGA CTTCCGCTGC CTGTGGTGTA 001360 001361 ATTCTACGGT GCATGATGAC TGTAGGAGAC GGTTTTCCAA GGAATGTTGC TTCAGAAGCC ATCGCTCATC AGTCATTCCT 001440 001441 CCCACTGCTC TAAGCGACCC CAAAGGCGAT GGCCAATTAG TAGTATCTTC AGACTTCTGG AATCTTGATT GGTCATCAGC 001520 001521 CTGTTCATGT CCCTTGCTCA TCTTCATCAA CTCCAAAAGT GGCGATCATC AGGGGATCGT CTTCCTCCGA AAATTCAAGC 001600 001601 AATACCTTAA CCCATCTCAA GTGTTCGACT TATTGAAGGG TGGACCTGAA GCAGGGCTGT CTATGTTCAA GAACTTTGCT 001680 001681 CGCTTTCGCA TTCTGGTTTG TGGTGGAGAT GGCAGCGTGA GCTGGGTCTT ATCTCTGATT GATGCCTTTG GATTACATGA 001760 001761 AAAGTGTCAG TTGGCAGTCA TCCCACTTGG AACCGGCAAT GATCTGGCTC GTGTTCTGGG CTGGGGTGCA TTCTGGAACA 001840 001841 AAAGCAAGTC ACCTCTGGAC ATCCTCAACA GAGTGGAGCA GGCTAGTGTG AGGATCCTAG ACAGATGGAG TGTGATGATT 001920 001921 CGTGAGACTC CCAGACAAAC CCCGCTGCTA AAAGGACAGG TTGAAATGGA TGTACCACGA TTTGAGGCTG CTGCCATCCA 002000 002001 ACACTTAGAA TCTGCAGCCA CCGAGTTGAA CAAAATCCTG AAGGCCAAGT ACCCCACAGA GATGATCATC GCAACCAGAT 002080 002081 TCTTGTGTTC AGCTGTGGAA GATTTTGTGG TTGATATTGT AAAGGCCTGG GGTCAGATAA AACAGAACAA CACTGCAATA 002160 002161 GTGTCTGTGA TTTTGAAAAG TGACTTAATG TATGATAGGC TCAGTGTCCT GATCGATGTC CTGGCTGAGG AGGCAGCAGC 002240 002241 TACTTCTGCT GAAAAAAGTG CTACAGAATA TGCAGACAGC AGCAAGGCAG ATAGGAAGCC CTTCATTCCT CAAATAGACC 002320 002321 ACATAGCCAA GTGCAAGTTG GAGCTGGCTA CAAAGGCCCA GAGTCTCCAG AAATCCTTGA AACTCATCAT ATTTCAAGTT 002400 002401 GAACAAGCTC TGGATGAGGA AAGCAGACAG ACAATATCTG TTAAGAACTT TAGTTCAACT TTCTTCCTGG AAGATGACCC 002480 002481 AGAAGATATT AACCAGACAA GCCCACGACG CCGTTCTCGT CGTGGCACTT TGTCTTCTAT ATCTTCTCTC AAAAGTGAGG 002560 002561 ACCTGGACAA CCTTAACTTG GATCACTTAC ATTTTACACC TGAATCTATA CGCTTCAAAG AAAAATGTGT CATGAACAAC 002640 002641 TACTTCGGAA TTGGACTGGA TGCTAAAATT TCTCTGGACT TCAACACCAG AAGAGATGAA CACCCAGGGC AATACAATAG 002720 002721 CCGCCTTAAG AACAAGATGT GGTATGGCCT TCTGGGAACC AAAGAACTTT TGCAGCGCTC TTACAGGAAA CTGGAAGAAC 002800 002801 GAGTGCATTT GGAGTGTGAT GGAGAAACCA TCTCCTTGCC AAACCTGCAA GGCATTGTAG TGCTCAACAT TACCAGCTAT 002880 002881 GCTGGAGGTA TCAACTTCTG GGGAAGCAAC ACAGCAACCA CGGAATATGA GGCTCCTGCA ATCGATGATG GGAAACTGGA 002960 002961 GGTGGTGGCA ATCTTTGGTT CTGTGCAGAT GGCAATGTCC CGTATCATCA ACCTGCATCA TCATCGCATT GCCCAGTGCC 003040 003041 ATGAGGTGAT GATAACCATT GATGGTGAAG AAGGTATCCC AGTGCAGGTG GATGGGGAGG CCTGGATTCA GAGACCAGGC 003120 003121 TTATCAAAAT TAGATACAAG AACGCTGCCC AGATGCTGAC AAGAGATCGG GACTTTGAGA ACTCAATGAA AATGTGGGAA 003200 003201 TACAAGCATA CTGAAATTCA AGCTGCCCCT CAACCCCAGC TGGACTTCCA GGACTCTCAA GAGAGCCTCT CTGACGAGGA 003280 003281 GTATGCCCAG ATGCAGCACT TAGCTCGGCT TGCAGAAAAC CTCATCAGCA AACTTAATGA CCTGAGCAAG ATCCACCAGC 003360 003361 ATGTGTCTGT CCTCATGGGT TCTGTGAATG CCAGCGCTAA CATCCTGAAT GATATATTTT ACGGCCAAGA CAGTGGCAAT 003440 003441 GAGATGGGTG CAGCTTCCTG TATTCCCATT GAAACTCTAA GCAGAAATGA TGCCGTAGAT GTTACATTTA GTCTTAAAGG 003520 003521 TCTCTACGAT GACACCACAG CTTTCCTGGA TGAAAAGCTG CTGAGAAGTG CTGAGGATGA GACTGCACTA CAAAGCGCCC 003600 003601 TGGATGCCAT GAATAAGGAG TTCAAAAAGC TATCTGAGAT TGACTGGATG AATCCAATCT TTGTTCCAGA GGAAAAATCT 003680 003681 TCGGACACTG ACAGTAGAAG CCTCAGGCTG AAAATTAAGT TCCCCAAATT GGGAAAGAAA AAGGTAGAAG AGGAACGCAA 003760 003761 GCCTAAATCA GGCCAGAGTG TCCAGAGTTT TATTGGCAAT TTATGGCACC GCAGACATCG TGAAGATGAA GCAGAGGGTG 003840 003841 ATGATCCTCT AACACCATCG AGATCTCAAC TGTAGCCCTT GAAAGCTGGA AGAACTCACA ACATTGAGAA TTCTACTAAA 003920 003921 AAAACTCTCA AAACCTCAAT ACAGGCTAGA CTAAATCATT TCAGAACAAA CATGAGCACC ACCAAGAAAG ACCCTCCAAT 004000 004001 TCTTTTCACT AATGCATTTT CCTGGACTTA ATCTGGTCTC CTTAGAGGTT TACATTTCCT CATTGGCCAA AGGTTCTTGT 004080 004081 TCCGAGTTGT CTTGTTCAGT TCTCCTTCTC TTTGTGCATC TTGAGCAACT ACAGTATTTA TTGGGATAAG CTCTTTATGA 004160 004161 ATGGCCTGGG ATCTATAAAG GATTCAAGGG AGTTCACCTC TTCAGGGAGT TTTGGAATGG TTTTCTCTGA CCAGCAGAGA 004240 004241 AACTATCAAT GCTAAGGAAT GAATGAAAGA CACACAGACT CCCAGGGAGA TGAAGAGAAG GGGGCAGGCA GGACAGCCAG 004320 004321 ACTTGGTTGT GTGTCTCTCC GAATCCCTGC CAACTGCAAC TTGCACCTTC AGGAGATCTC TTCTAGTTGG CTCATTAAAA 004400 004401 TGAGAACTAG ATCCTGGGGG CTTGTCCACT TTCCTGTTAA GATGACCATG TGAAATCTCT TTTTGTAGAT ATGGTAACCT 004480 004481 CTCTCTCTCT CTGCAAACCC TTTGCGTTTT TCTATGTGTG CTTGTATGTC TGCATATGTC CAGGTGGTGC TCTGGTGGGC 004560 004561 TCATTGGTTG GAACTCACCC CTCATGGCAA CCATACAGGC TCCCCTCCTG CTGCCTTGAT CCTAGCCTGC ATGCCTCCAC 004640 004641 GGAGTGTTTG CCTGCATTCT TGCTGGATTT TTTAACTAAA TGTTTTGCCG CTGTGCTGCA GTATAGATTA TGTATAGAGA 004720 004721 CATAAAGATG TATATATATA TACATACGCA TATATATTTT TAAGAGCTGA AAATACAACT CGACCTCTAA GTGACCCTAT 004800 004801 AATTTATTGT GCTAATCCAG GAATCCCTTC CCACTCCCCC TTACTCTACA TAACAATAAC ACATACACCT CTACCAACTG 004880 004881 CCCTATTTCT TGGTGGAGCT TCTAAATCTT TTGGTGCATT TTCAGCGTCT TAGAGGTGGC TGGGATCTAT GGCCCAGCTG 004960 004961 ATTCTGACGC CCCCTTAAAA TTCTGAGCCA GGCCATGGAA AGGGGAACAA AAACACCAAT GCCCTAAAGA AGGGGTTTAA 005040 005041 GCTGGCATGC TGCCTTTTTT TGCTCTATCT GTCCTAGACT CTTCATCAGC AACTGTGCCC TTCCCCAATA AAAAGACTAT 005120 005121 ATGGAGCAAC CAGGCCTTGA GCTCTGTGAC TTAGATGCCT GAACTAGGGA CTGCCTGACA ATTAAGTCAC AGCCTAGGCC 005200 005201 CTTCCCCACA AGCTCCATCT TGGCCTGATC TTCTGGACAG GCTGTTGGGT CAGTCCTCAA GTCACCTTCA AATCTCCCAT 005280 005281 CTTGCCCTTT TCCCTTGAGT ACAGAGGGGC ATTGAAGTGA TCAGAAAAAA CATGGGCCTG GAGAAATGAA GGCTAGAAGC 005360 005361 CTGTGCTTTC CTGTGGTTCT TCTTGCAAAT TTCTCATGAA AACAAACTAT TCCTAAATCG CTCCAAATAC TAATTCACAT 005440 005441 TTTTCAAAAA TGCCTTCTCC CAGTCAGGGC AAATCTAATC AAACCCCAAT GCCCAGAGAG GTTCTCTCTG GTCAGCCTTG 005520 005521 CATCTTCACC CCACCCTTGA CTCATACCTT TAGTTAACTG TCCCTTCCCA CTTATCAAGA GAAAACTGGC CTCTCCCTAC 005600 005601 TTCTCAGACA AACTTAGCGT GCTCAATTAC CTGATTCAGT CCAATGGCTG GTTCATTGAG GTGCACAATT CAGATTCCAA 005680 005681 GCACTGGTTC TCAACTCTGG AACTCCACCA GCCTAACCCA CTTAAACCAG CCACCTGTGC TCCACCTCCG CAGGGGTGAG 005760 005761 GAGAAAAATA TTAACAAGGG GATAGTCCCC AAATGTCTGA TTGCTGTGCC AAACTAAGTC CTAGCTCTAC AACTAGAGAA 005840 005841 GAAAGTCAAT GGAAAAAGAT GACAGAAAAC ATTTAAAACT TATTTAAGCA TCAGAATGTG TTAGCTTGTT GTACATATTT 005920 005921 GAGTAGTGAG TGTGCTGTTG TTGTGTCTTT GACTTTCTCT GTTATTAGTC TTTCTTCCCA GGAGGAGGTA TTAGATGAAA 006000 006001 TCAGCAAGCT CACTATTGCA GCCTGACTTG GCTCCTCTAT GGCTGCATGC ATTGACACCT GCACACACAC TCACAGAGTG 006080 006081 GGAACCAAGT TGCATTTTCT TCAGAAGAGC TTTTTCCGAA GGGGAAAATG TCCAAATGAG CAAATTTAGG ACTACAGAAG 006160 006161 GAAGTCCTGG GAGAAGATAG CTTTATCTTG GCAGTGACTA AGCAGGGCTG TGTCTTATAA TTATTTTTAT CACTGATGAT 006240 006241 AGTAAACTGT AATAAGACTC CATCTCTTGT GCTTACTTTG CTGCAATAAT TAGGTCTTTG TGCACAGTGA TGCTGCTGTT 006320 006321 GCTCTGTTGT GCCATGTGGA TTCCCTTTCA CCTACCCTGT CCTCCCACTC TGAGTCAGAA TGATATTGAC TGAAACCACT 006400 006401 AGTATTTGGG GCTAGAGTCA GCTCATGGAG CACAGTTGAT AGATGACAAG GCCCAGGAGC AGGTGTGGCT TGCTCAATCC 006480 006481 CTCAGTTACC TCCTAAATTG CTAAGTTACC AGTAGTTTCC CAAAAAGGAA GATAGCTTGC CAAGCACCTG TTCTTGCATA 006560 006561 TGCTCACTTG GAAACAAAGC AAGAAGTGAT GCCTCAAGGG AGTTGTCTTA GCTCTGGGAG TGTGAGCTCC TTTAAGGACT 006640 006641 TTGTTAACCA CTTGCAGTAA TTAATACAAT TGCTTGGGTG GTGGGACCAA ACACCAAATA TCCATCTCAA TTATGTTCAG 006720 006721 ACATCATTAA GACCCAAAGC TCTAGGGTTT GGTTGTATCT TTGGTAGCAC TTTCTGACGA ATTGGTTGGG TAGGCAATTC 006800 006801 CTGGCCAGAA GAATAGTGGA GAAGAAAAAG CCGATACATT TGAACTGCCA CCAACTGCTT CTGGTGTCAA TACTATAGGA 006880 006881 GGTAAACAGT TATGGGTCCC CTTCTCCAGA AAGGCCCTGT GCTGTGTCCA TAAGAGCAGG TTAAGAATAA GAAAGAGATT 006960 006961 TTTTACCTTA ATAAAACTGG GCCAGAAGAA ACAGTCAGGG TCAACGTCAT CTTCCCTCAG GACACAAATG GAAGAATTTT 007040 007041 TCTTTCACGA GAGGTGGAAA ATAATACCAA AGCAACCAAA CCCATTAGCA CCATTCCATC CTATATGAGA CCTTGCTTGG 007120 007121 CTATATGATT TGTGGAATTG CATTTGTCTA TTTGTCAGTG AATCTGTAAC CCATTGTTGT TTTCTGCTCT GTGTTTTTTA 007200 007201 TTTCCTCAGA GGCCCCTGCA AATAAGCAGC AGGGCCAGGG GCTGGTTGGG GGAGGAAGCT GGGGTATTTA CATGGTAACA 007280 007281 GGAAAAAGCA GAAAAAAAAG ATCCACAAAG TGTGCCTATT CCTCTCCCCC CGCCAAATGG AACACCAGTC CTCAATGTTA 007360 007361 ATAAAGTATT GCTTCTTTAA ATATTTTAAT AAATGGATAA ACATAA

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